So with the want to get rid of the evils that plagued the land once and for all, which would end with the destruction of the Guardians of Chaos and Hades, Khrona decided that instead of doing it himself, like he definitely could have, he would let his people actually do something for themselves, for once. Naturally, a grand majority of them were rather disappointing to Khrona, but he didn't let that get him down. Instead, he gave them an incentive, realizing that there was no one in charge of the new Dawn and Dusk, he issued the Kage Trials in order to get them motivated and get some leaders into position of the villages of the Veritas.
Once Koudo went through his Trial, there was an abrupt halt due to the inevitable rise of evil due to the start of a genocide between people, and pissed Khrona off. This put the Veritas on lockdown, since one of the shinobi, Shabuto, was killed. Thus, the Kage Trials were canceled. So in the meantime, he went to go talk to his family and get things straightened out with them, and also within himself while he waited for things to pick back up. In that time, not much happened, however the villagers grew impatient and indeed decided to ACTUALLY and FINALLY take things upon themselves and go rid the world of evil. For once. It made Khrona happy that they actually grew some balls and brains started doing things on their own for once, and he felt like that 'sheltered' attitude that they had been given due to he and Maze's endeavors in the past was starting to fade... Slowly, but surely.
With that, they slayed all the Guardians of Chaos, and they became the new Guardians (Koudo, Savaj, Akira and Sophia), but to truly rid the Veritas of Chaos and bring Order and Harmony, the four would have to go to slay Hades and take the White Grimoire from him and see if their hearts truly wished for Order. That is what's happening right now. They got themselves and their Weapons to the top, only to face Hades and Ultima Weapon, where the battle rages on. Meanwhile, Alex Star and Erik search for the Black Grimoire, the Forbidden Grimoire that holds a power equal to the White, and controls a beast even greater than the Ultima Weapon; the final weapon that Kuja had hidden away within his Desert Palace; Omega Weapon.
Also, Khrona is fixing up the Veritas from the Tree, since he is all that it is, and can alter the land to his will, he is trying his best to put everything in order before the next Night of Tensei, where the Age of Crystal will be broken. He has currently ascended to the Twelfth, obtaining his form as Free Will, which is the last stage in the Restrictions. Plus, Evangeline and her light returned (we'll work that out later.)
Though, even though things seemed to be returning to goodness, Maze Rituke, who had been gone walking through many timelines, had seen despair. He figured this to be the despair of Free Will (which just so happens to be Khrona) and wishes for Order. Whilst Khrona and Maze both want Order, whose will shall be done? Which brother shall become victor? Whose Order shall be the Order upon the Veritas?